Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC187A0A096LP49 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 AC109635.5-201ENST00000533593 962 ntBASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 AF228730.6-201ENST00000641497 218 ntBASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 AC084121.3-201ENST00000641716 218 ntBASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 AC105233.6-201ENST00000642093 218 ntBASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCDC187A0A096LP49 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.14■□□□□ 0.18
CCDC187A0A096LP49 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 TSPY16P-201ENST00000449843 468 ntBASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 IGHV3-42-201ENST00000520410 361 ntBASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 AC026150.2-201ENST00000564693 1156 ntBASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC187A0A096LP49 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.13■□□□□ 0.17
CCDC187A0A096LP49 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms