Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TSSC4Q9Y5U2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 AL162727.3-201ENST00000635661 2787 ntBASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 ACTG1P4-201ENST00000425123 1122 ntBASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 AL353135.1-201ENST00000606729 504 ntBASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 AC010654.1-201ENST00000615722 808 ntBASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TSSC4Q9Y5U2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 AC004790.2-201ENST00000623588 572 ntBASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TSSC4Q9Y5U2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms