Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA9Q9Y5G4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 AC097637.2-201ENST00000624096 1997 ntBASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 MYCLP1-201ENST00000372451 1075 ntBASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 AC074386.1-202ENST00000463561 864 ntBASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 AL031432.2-201ENST00000566714 459 ntBASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 AL928711.1-201ENST00000570165 459 ntBASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA9Q9Y5G4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGA9Q9Y5G4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PCDHGA9Q9Y5G4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA9Q9Y5G4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA9Q9Y5G4 PP12613-201ENST00000424958 2230 ntBASIC16.02■□□□□ 0.15
PCDHGA9Q9Y5G4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGA9Q9Y5G4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA9Q9Y5G4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA9Q9Y5G4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AC046158.3-201ENST00000624947 2558 ntBASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AC002558.1-201ENST00000488906 803 ntBASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AC023141.13-201ENST00000604991 943 ntBASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AL391005.1-201ENST00000623953 2435 ntBASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 AC084018.2-201ENST00000613093 2607 ntBASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA9Q9Y5G4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms