Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 AL441883.1-201ENST00000566170 1045 ntBASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
UBE2D4Q9Y2X8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 FRMD8P1-201ENST00000440433 1524 ntBASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
UBE2D4Q9Y2X8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 HLA-A-202ENST00000376806 1854 ntBASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 AC092597.1-201ENST00000487352 616 ntBASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 COX11P1-201ENST00000489116 835 ntBASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 AC005332.3-201ENST00000589904 676 ntBASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UBE2D4Q9Y2X8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UBE2D4Q9Y2X8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms