Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 MYCLP1-201ENST00000372451 1075 ntBASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 AC009947.2-201ENST00000444014 672 ntBASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 NEK4P2-201ENST00000580004 1012 ntBASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KCNIP3Q9Y2W7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 AP000523.1-201ENST00000398242 1049 ntBASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 TSPY12P-201ENST00000421279 868 ntBASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 AC012618.2-201ENST00000428058 849 ntBASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 AC128688.1-201ENST00000487626 519 ntBASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 AC113410.3-201ENST00000623366 203 ntBASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 AL049637.2-201ENST00000641778 930 ntBASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KCNIP3Q9Y2W7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
KCNIP3Q9Y2W7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms