Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 AC024909.3-201ENST00000611513 2257 ntBASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RCL1Q9Y2P8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 AC009947.2-201ENST00000444014 672 ntBASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 AL157888.1-201ENST00000631930 593 ntBASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 AC116562.4-202ENST00000641738 218 ntBASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 KRT89P-201ENST00000620027 1478 ntBASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RCL1Q9Y2P8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 HLA-A-202ENST00000376806 1854 ntBASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 AC009154.2-201ENST00000621177 724 ntBASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 AC113410.3-201ENST00000623366 203 ntBASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.04□□□□□ -0.16
RCL1Q9Y2P8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms