Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 BASP1P1-201ENST00000430708 665 ntBASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 TSPY16P-201ENST00000449843 468 ntBASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 SPDYE12P-201ENST00000618416 771 ntBASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SHANK2Q9UPX8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 AP005018.1-201ENST00000525475 301 ntBASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 AL138918.1-201ENST00000568306 659 ntBASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 AC134043.2-201ENST00000624206 2238 ntBASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
SHANK2Q9UPX8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 PRYP6-201ENST00000514804 343 ntBASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 RARRES2P9-201ENST00000565168 469 ntBASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 MIR6752-201ENST00000618442 71 ntBASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC25.12■■□□□ 1.61
SHANK2Q9UPX8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 NOC2LP2-201ENST00000407594 1944 ntBASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 AL359881.2-201ENST00000602973 570 ntBASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SHANK2Q9UPX8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 SNX33P1-201ENST00000592116 1762 ntBASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SHANK2Q9UPX8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms