Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DGCR5-201ENST00000399539 862 ntBASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 AL035456.1-201ENST00000456064 1369 ntBASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 HCG4-201ENST00000418983 998 ntBASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3H4Q9UPT8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AC142381.1-201ENST00000426099 345 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AL033527.4-201ENST00000641026 673 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AC132938.2-201ENST00000579188 680 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AL844908.2-201ENST00000609461 460 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 AL591163.1-201ENST00000641757 987 ntBASIC20.53■□□□□ 0.88
ZC3H4Q9UPT8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H4Q9UPT8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms