Protein–RNA interactions for Protein: Q9UN30

SCML1, Sex comb on midleg-like protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1Q9UN30 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCML1Q9UN30 TOP3BP1-201ENST00000420768 1380 ntBASIC17.02■□□□□ 0.31
SCML1Q9UN30 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML1Q9UN30 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML1Q9UN30 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML1Q9UN30 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML1Q9UN30 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML1Q9UN30 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCML1Q9UN30 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML1Q9UN30 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCML1Q9UN30 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 AL138688.1-201ENST00000624851 1594 ntBASIC17.01■□□□□ 0.31
SCML1Q9UN30 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
SCML1Q9UN30 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17■□□□□ 0.31
SCML1Q9UN30 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCML1Q9UN30 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SCML1Q9UN30 AC008764.6-201ENST00000595909 2069 ntBASIC17■□□□□ 0.31
SCML1Q9UN30 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCML1Q9UN30 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 HMGA1P7-201ENST00000406908 502 ntBASIC17■□□□□ 0.31
SCML1Q9UN30 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17■□□□□ 0.31
SCML1Q9UN30 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17■□□□□ 0.31
SCML1Q9UN30 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17■□□□□ 0.31
SCML1Q9UN30 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCML1Q9UN30 TIMM8BP1-201ENST00000452384 211 ntBASIC17■□□□□ 0.31
SCML1Q9UN30 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCML1Q9UN30 AC109635.5-201ENST00000533593 962 ntBASIC17■□□□□ 0.31
SCML1Q9UN30 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17■□□□□ 0.31
SCML1Q9UN30 AC004449.1-201ENST00000564240 433 ntBASIC17■□□□□ 0.31
SCML1Q9UN30 RARRES2P8-201ENST00000566335 367 ntBASIC17■□□□□ 0.31
SCML1Q9UN30 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17■□□□□ 0.31
SCML1Q9UN30 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17■□□□□ 0.31
SCML1Q9UN30 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCML1Q9UN30 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17■□□□□ 0.31
SCML1Q9UN30 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCML1Q9UN30 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17■□□□□ 0.31
SCML1Q9UN30 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SCML1Q9UN30 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SCML1Q9UN30 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML1Q9UN30 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML1Q9UN30 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML1Q9UN30 AC093525.9-201ENST00000624961 1746 ntBASIC16.99■□□□□ 0.31
SCML1Q9UN30 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML1Q9UN30 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML1Q9UN30 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 MIR3909-201ENST00000579518 119 ntBASIC16.99■□□□□ 0.31
SCML1Q9UN30 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 AP001350.2-201ENST00000625104 1094 ntBASIC16.99■□□□□ 0.31
SCML1Q9UN30 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML1Q9UN30 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
SCML1Q9UN30 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML1Q9UN30 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCML1Q9UN30 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms