Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 PCDH8P1-201ENST00000428983 2773 ntBASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 AC010460.3-201ENST00000511359 1579 ntBASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC00474Q9P2X8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 AC134043.2-201ENST00000624206 2238 ntBASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 NUS1P2-201ENST00000417358 873 ntBASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 RBM17P3-201ENST00000417687 1192 ntBASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 MIR5100-201ENST00000579544 119 ntBASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 BNIP3P18-201ENST00000593976 575 ntBASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 AC138894.3-201ENST00000603787 634 ntBASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 INTS4P1-201ENST00000438455 1935 ntBASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC00474Q9P2X8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
LINC00474Q9P2X8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms