Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 U1.21-201ENST00000580816 167 ntBASIC17.91■□□□□ 0.46
CHD7Q9P2D1 AC073389.1-201ENST00000595595 795 ntBASIC17.91■□□□□ 0.46
CHD7Q9P2D1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD7Q9P2D1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 AL353732.1-201ENST00000569618 1459 ntBASIC17.9■□□□□ 0.46
CHD7Q9P2D1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 RPL37AP1-201ENST00000412502 279 ntBASIC17.9■□□□□ 0.46
CHD7Q9P2D1 AP006294.1-201ENST00000415407 339 ntBASIC17.9■□□□□ 0.46
CHD7Q9P2D1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.9■□□□□ 0.46
CHD7Q9P2D1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 GNAQP1-201ENST00000444815 1067 ntBASIC17.9■□□□□ 0.46
CHD7Q9P2D1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.9■□□□□ 0.46
CHD7Q9P2D1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 AL023806.1-201ENST00000603994 1649 ntBASIC17.9■□□□□ 0.46
CHD7Q9P2D1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHD7Q9P2D1 LYSMD4-203ENST00000378904 2122 ntBASIC17.89■□□□□ 0.46
CHD7Q9P2D1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHD7Q9P2D1 LINC00304-203ENST00000565008 1864 ntBASIC17.89■□□□□ 0.46
CHD7Q9P2D1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 AC135586.1-201ENST00000539323 574 ntBASIC17.89■□□□□ 0.45
CHD7Q9P2D1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 AC009113.1-201ENST00000570267 2443 ntBASIC17.89■□□□□ 0.45
CHD7Q9P2D1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 BCYRN1-201ENST00000418539 200 ntBASIC17.89■□□□□ 0.45
CHD7Q9P2D1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHD7Q9P2D1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 AC098614.1-201ENST00000368528 745 ntBASIC17.88■□□□□ 0.45
CHD7Q9P2D1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 CTBP2P3-201ENST00000585629 1255 ntBASIC17.88■□□□□ 0.45
CHD7Q9P2D1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 SLC7A15P-201ENST00000424028 1363 ntBASIC17.88■□□□□ 0.45
CHD7Q9P2D1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.88■□□□□ 0.45
CHD7Q9P2D1 AC092658.1-201ENST00000505836 891 ntBASIC17.88■□□□□ 0.45
CHD7Q9P2D1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms