Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 AC246785.2-201ENST00000432512 513 ntBASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 AC068472.1-201ENST00000474589 881 ntBASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 PCDHB19P-201ENST00000570871 2371 ntBASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 AP002414.4-201ENST00000589764 1148 ntBASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 NPAP1P7-201ENST00000613027 823 ntBASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LIN7CQ9NUP9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.27□□□□□ -0.12
LIN7CQ9NUP9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 AC124947.2-201ENST00000547118 1133 ntBASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LIN7CQ9NUP9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 AC097374.2-201ENST00000618617 1306 ntBASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 UBALD1-205ENST00000590891 2641 ntBASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LIN7CQ9NUP9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms