Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 AC008894.3-201ENST00000624324 3103 ntBASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 AL355312.1-201ENST00000407115 2176 ntBASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 LINC00304-203ENST00000565008 1864 ntBASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NECTIN3Q9NQS3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 AC132938.5-201ENST00000624980 1813 ntBASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 AC002558.1-201ENST00000488906 803 ntBASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 TP73-AS1-207ENST00000624167 988 ntBASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NECTIN3Q9NQS3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 IGHV3-52-201ENST00000519770 353 ntBASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 LINC01451-201ENST00000623792 534 ntBASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.46■□□□□ 0.23
NECTIN3Q9NQS3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NECTIN3Q9NQS3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.46■□□□□ 0.22
NECTIN3Q9NQS3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
NECTIN3Q9NQS3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.46■□□□□ 0.22
NECTIN3Q9NQS3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NECTIN3Q9NQS3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.45■□□□□ 0.22
NECTIN3Q9NQS3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms