Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HPS4Q9NQG7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 AC138028.4-201ENST00000564984 1845 ntBASIC17.72■□□□□ 0.43
HPS4Q9NQG7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.72■□□□□ 0.43
HPS4Q9NQG7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 ACTG1P14-201ENST00000446382 1122 ntBASIC17.72■□□□□ 0.43
HPS4Q9NQG7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 PAWRP1-201ENST00000451083 565 ntBASIC17.72■□□□□ 0.43
HPS4Q9NQG7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 ACTL9-202ENST00000612068 1252 ntBASIC17.72■□□□□ 0.43
HPS4Q9NQG7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 AC067852.2-201ENST00000590513 2313 ntBASIC17.72■□□□□ 0.43
HPS4Q9NQG7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.72■□□□□ 0.43
HPS4Q9NQG7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 AL645939.2-201ENST00000427340 991 ntBASIC17.71■□□□□ 0.43
HPS4Q9NQG7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 AC068137.2-201ENST00000605408 478 ntBASIC17.71■□□□□ 0.43
HPS4Q9NQG7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.71■□□□□ 0.43
HPS4Q9NQG7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HPS4Q9NQG7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HPS4Q9NQG7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.71■□□□□ 0.42
HPS4Q9NQG7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 AC092919.2-201ENST00000623631 1645 ntBASIC17.7■□□□□ 0.42
HPS4Q9NQG7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 SLC25A6P2-201ENST00000497974 877 ntBASIC17.7■□□□□ 0.42
HPS4Q9NQG7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 AP000344.2-201ENST00000512987 629 ntBASIC17.7■□□□□ 0.42
HPS4Q9NQG7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.7■□□□□ 0.42
HPS4Q9NQG7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms