Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 MIR1233-2-201ENST00000408138 82 ntBASIC15.91■□□□□ 0.14
MMP25Q9NPA2 MIR1233-1-201ENST00000408722 82 ntBASIC15.91■□□□□ 0.14
MMP25Q9NPA2 AC023274.1-201ENST00000418278 595 ntBASIC15.91■□□□□ 0.14
MMP25Q9NPA2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 MTDHP5-201ENST00000598980 586 ntBASIC15.91■□□□□ 0.14
MMP25Q9NPA2 AC139530.3-201ENST00000620344 690 ntBASIC15.91■□□□□ 0.14
MMP25Q9NPA2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
MMP25Q9NPA2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 UPF3AP3-201ENST00000420996 769 ntBASIC15.9■□□□□ 0.14
MMP25Q9NPA2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.9■□□□□ 0.14
MMP25Q9NPA2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 AP001094.4-201ENST00000579008 2176 ntBASIC15.9■□□□□ 0.14
MMP25Q9NPA2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP25Q9NPA2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.89■□□□□ 0.13
MMP25Q9NPA2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 AC106820.2-201ENST00000563775 3264 ntBASIC15.89■□□□□ 0.13
MMP25Q9NPA2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 MCCD1P2-201ENST00000423228 335 ntBASIC15.89■□□□□ 0.13
MMP25Q9NPA2 RHOQP3-201ENST00000437982 621 ntBASIC15.89■□□□□ 0.13
MMP25Q9NPA2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 AC018845.2-201ENST00000568326 409 ntBASIC15.89■□□□□ 0.13
MMP25Q9NPA2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 MIR3687-2-201ENST00000577708 61 ntBASIC15.89■□□□□ 0.13
MMP25Q9NPA2 MIR3687-1-201ENST00000614492 61 ntBASIC15.89■□□□□ 0.13
MMP25Q9NPA2 AC010507.1-201ENST00000633895 436 ntBASIC15.89■□□□□ 0.13
MMP25Q9NPA2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
MMP25Q9NPA2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms