Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 HNRNPDP1-201ENST00000439535 754 ntBASIC14.67□□□□□ -0.06
GCM1Q9NP62 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 OR7E14P-202ENST00000530490 1290 ntBASIC14.67□□□□□ -0.06
GCM1Q9NP62 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 AC107918.4-202ENST00000641623 219 ntBASIC14.67□□□□□ -0.06
GCM1Q9NP62 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.67□□□□□ -0.06
GCM1Q9NP62 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GCM1Q9NP62 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 NCF1C-201ENST00000438382 1427 ntBASIC14.66□□□□□ -0.06
GCM1Q9NP62 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 AL031284.1-201ENST00000419297 478 ntBASIC14.66□□□□□ -0.06
GCM1Q9NP62 LAGE3P1-201ENST00000425356 484 ntBASIC14.66□□□□□ -0.06
GCM1Q9NP62 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 AC139887.3-201ENST00000568585 713 ntBASIC14.66□□□□□ -0.06
GCM1Q9NP62 AP001005.1-201ENST00000571755 1248 ntBASIC14.66□□□□□ -0.06
GCM1Q9NP62 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 AC063926.3-201ENST00000624734 5658 ntBASIC14.66□□□□□ -0.06
GCM1Q9NP62 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GCM1Q9NP62 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GCM1Q9NP62 HLA-A-201ENST00000376802 1334 ntBASIC14.66□□□□□ -0.06
GCM1Q9NP62 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GCM1Q9NP62 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.65□□□□□ -0.06
GCM1Q9NP62 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms