Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AC009947.1-201ENST00000444350 727 ntBASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AC025062.2-201ENST00000605477 670 ntBASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AC023824.1-201ENST00000562945 2975 ntBASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SCAF1Q9H7N4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 CD82-202ENST00000342935 967 ntTSL 5 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 IRX1P1-201ENST00000438849 1838 ntBASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 KRT8P7-201ENST00000533003 1432 ntBASIC25.64■■□□□ 1.7
SCAF1Q9H7N4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SCAF1Q9H7N4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
SCAF1Q9H7N4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.69
SCAF1Q9H7N4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.69
SCAF1Q9H7N4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
SCAF1Q9H7N4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 DUX4L17-201ENST00000557360 1267 ntBASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 AC132872.4-202ENST00000622924 2756 ntBASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC25.63■■□□□ 1.69
SCAF1Q9H7N4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC25.62■■□□□ 1.69
SCAF1Q9H7N4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms