Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIPK3Q9H422 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 MIR4453-201ENST00000584019 89 ntBASIC18.6■□□□□ 0.57
HIPK3Q9H422 AC027307.2-201ENST00000591252 911 ntBASIC18.6■□□□□ 0.57
HIPK3Q9H422 AL008721.1-201ENST00000609964 604 ntBASIC18.6■□□□□ 0.57
HIPK3Q9H422 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIPK3Q9H422 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.6■□□□□ 0.57
HIPK3Q9H422 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 AC007274.1-201ENST00000439805 662 ntBASIC18.59■□□□□ 0.57
HIPK3Q9H422 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 AC004890.2-204ENST00000481968 304 ntBASIC18.59■□□□□ 0.57
HIPK3Q9H422 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 CR383656.12-201ENST00000549567 513 ntBASIC18.59■□□□□ 0.57
HIPK3Q9H422 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIPK3Q9H422 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
HIPK3Q9H422 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.58■□□□□ 0.57
HIPK3Q9H422 AL353732.1-201ENST00000569618 1459 ntBASIC18.58■□□□□ 0.57
HIPK3Q9H422 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
HIPK3Q9H422 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIPK3Q9H422 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
HIPK3Q9H422 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIPK3Q9H422 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HIPK3Q9H422 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.58■□□□□ 0.57
HIPK3Q9H422 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HIPK3Q9H422 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HIPK3Q9H422 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
HIPK3Q9H422 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIPK3Q9H422 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 AL662799.1-202ENST00000614205 422 ntBASIC18.58■□□□□ 0.56
HIPK3Q9H422 AC025048.6-201ENST00000634326 1161 ntBASIC18.58■□□□□ 0.56
HIPK3Q9H422 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK3Q9H422 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK3Q9H422 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK3Q9H422 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK3Q9H422 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIPK3Q9H422 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.58■□□□□ 0.56
HIPK3Q9H422 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIPK3Q9H422 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms