Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 NFIC-211ENST00000641145 8399 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 RPS2P1-201ENST00000434010 821 ntBASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 AC073592.5-201ENST00000624854 528 ntBASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 AC022211.2-201ENST00000585075 2527 ntBASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCGF1Q9BSM1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 AC018712.1-201ENST00000455767 687 ntBASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 OR7E14P-202ENST00000530490 1290 ntBASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 AC109462.3-201ENST00000573934 613 ntBASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 MTDHP4-201ENST00000600287 670 ntBASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 PMPCAP1-201ENST00000508114 1576 ntBASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCGF1Q9BSM1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms