Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 AC079781.3-201ENST00000449110 356 ntBASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSPG4P5Q96PW8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 AC078925.2-201ENST00000624013 1973 ntBASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 PTCHD3P3-201ENST00000403073 906 ntBASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 FAM197Y8-203ENST00000450145 560 ntBASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 AC018712.1-201ENST00000455767 687 ntBASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 KRT126P-201ENST00000549467 1181 ntBASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 AC006557.2-201ENST00000592985 1240 ntBASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CSPG4P5Q96PW8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 KRT18P27-201ENST00000427733 1299 ntBASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 HNRNPDP1-201ENST00000439535 754 ntBASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 OR7E14P-202ENST00000530490 1290 ntBASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 TUBB8P12-201ENST00000308911 1335 ntBASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 TUBB7P-202ENST00000428444 1305 ntBASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 TUBB8P7-204ENST00000567960 1332 ntBASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 FLJ38576-201ENST00000623820 2459 ntBASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSPG4P5Q96PW8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.61■□□□□ 0.41
CSPG4P5Q96PW8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms