Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 FAM86C2P-203ENST00000528684 1004 ntBASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 AC099522.2-201ENST00000607001 744 ntBASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 AC009093.7-201ENST00000623853 1223 ntBASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 LINC00628-201ENST00000628516 1289 ntBASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNGAP1Q96PV0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 LYSMD4-203ENST00000378904 2122 ntBASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 AL627223.1-201ENST00000416693 442 ntBASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 AC107918.2-201ENST00000530817 355 ntBASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 AC015911.4-201ENST00000588022 1070 ntBASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 AL096865.1-201ENST00000606796 927 ntBASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 AC026120.1-201ENST00000611536 926 ntBASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 AC020916.1-201ENST00000587762 1774 ntBASIC19.4■□□□□ 0.7
SYNGAP1Q96PV0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SYNGAP1Q96PV0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.39■□□□□ 0.7
SYNGAP1Q96PV0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
SYNGAP1Q96PV0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SYNGAP1Q96PV0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 BCRP1-201ENST00000444246 691 ntBASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 TIMM8BP1-201ENST00000452384 211 ntBASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 COX20P2-201ENST00000452636 358 ntBASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SYNGAP1Q96PV0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 AC093520.2-201ENST00000561830 333 ntBASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNGAP1Q96PV0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNGAP1Q96PV0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms