Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 AC106886.4-201ENST00000623557 2502 ntBASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 AC011676.5-201ENST00000624864 2660 ntBASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 SCARNA2-201ENST00000458748 420 ntBASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 AL353135.1-201ENST00000606729 504 ntBASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 AL589182.2-201ENST00000619332 1049 ntBASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 AC012313.10-201ENST00000623509 926 ntBASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 AL139384.1-201ENST00000612143 3047 ntBASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 TUBB7P-202ENST00000428444 1305 ntBASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 AKR1C7P-201ENST00000305623 895 ntBASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 KRT18P56-201ENST00000507275 550 ntBASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MS4A4EQ96PG1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 SART3-203ENST00000546611 1184 ntBASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 IFNL4P1-201ENST00000607083 540 ntBASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 AL139424.1-201ENST00000607572 797 ntBASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MS4A4EQ96PG1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MS4A4EQ96PG1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms