Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CASD1Q96PB1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASD1Q96PB1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASD1Q96PB1 AC131009.4-201ENST00000624048 1740 ntBASIC18.12■□□□□ 0.49
CASD1Q96PB1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CASD1Q96PB1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASD1Q96PB1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CASD1Q96PB1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CASD1Q96PB1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CASD1Q96PB1 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 AC140878.1-201ENST00000565277 250 ntBASIC18.12■□□□□ 0.49
CASD1Q96PB1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CASD1Q96PB1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 AL390961.4-201ENST00000623958 2535 ntBASIC18.12■□□□□ 0.49
CASD1Q96PB1 FRMD8P1-201ENST00000440433 1524 ntBASIC18.12■□□□□ 0.49
CASD1Q96PB1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
CASD1Q96PB1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 SPDYE7P-202ENST00000420373 878 ntBASIC18.11■□□□□ 0.49
CASD1Q96PB1 TREML5P-201ENST00000421694 576 ntBASIC18.11■□□□□ 0.49
CASD1Q96PB1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 ALG1L8P-201ENST00000533887 760 ntBASIC18.11■□□□□ 0.49
CASD1Q96PB1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 AP001350.2-201ENST00000625104 1094 ntBASIC18.11■□□□□ 0.49
CASD1Q96PB1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 AC016027.1-202ENST00000607927 1699 ntBASIC18.11■□□□□ 0.49
CASD1Q96PB1 AC116353.5-201ENST00000638148 1699 ntBASIC18.11■□□□□ 0.49
CASD1Q96PB1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.11■□□□□ 0.49
CASD1Q96PB1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CASD1Q96PB1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 GNAS-203ENST00000306120 1878 ntBASIC18.1■□□□□ 0.49
CASD1Q96PB1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CASD1Q96PB1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.1■□□□□ 0.49
CASD1Q96PB1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CASD1Q96PB1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms