Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 MIR940-201ENST00000401276 94 ntBASIC22.19■■□□□ 1.14
CFAP44Q96MT7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 ATP6V0CP3-201ENST00000417255 467 ntBASIC22.19■■□□□ 1.14
CFAP44Q96MT7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CFAP44Q96MT7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 PMS2P7-201ENST00000506558 1336 ntBASIC22.18■■□□□ 1.14
CFAP44Q96MT7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 REXO1L3P-201ENST00000622202 1288 ntBASIC22.18■■□□□ 1.14
CFAP44Q96MT7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP44Q96MT7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 RNA5SP416-201ENST00000516838 111 ntBASIC22.17■■□□□ 1.14
CFAP44Q96MT7 AC107918.2-201ENST00000530817 355 ntBASIC22.17■■□□□ 1.14
CFAP44Q96MT7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 AC092053.1-201ENST00000605787 1936 ntBASIC22.17■■□□□ 1.14
CFAP44Q96MT7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP44Q96MT7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 RHOQP3-201ENST00000437982 621 ntBASIC22.16■■□□□ 1.14
CFAP44Q96MT7 FAM185BP-201ENST00000443595 716 ntBASIC22.16■■□□□ 1.14
CFAP44Q96MT7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 AC124947.2-201ENST00000547118 1133 ntBASIC22.16■■□□□ 1.14
CFAP44Q96MT7 AC096734.2-201ENST00000562054 433 ntBASIC22.16■■□□□ 1.14
CFAP44Q96MT7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 AL691403.2-201ENST00000618460 490 ntBASIC22.16■■□□□ 1.14
CFAP44Q96MT7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP44Q96MT7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms