Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 AKAP8P1-201ENST00000434743 1349 ntBASIC19.86■□□□□ 0.77
CCDC17Q96LX7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.86■□□□□ 0.77
CCDC17Q96LX7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 MPDU1-223ENST00000582151 728 ntBASIC19.86■□□□□ 0.77
CCDC17Q96LX7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.86■□□□□ 0.77
CCDC17Q96LX7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 AC027796.2-201ENST00000575326 344 ntBASIC19.85■□□□□ 0.77
CCDC17Q96LX7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 AC018470.1-201ENST00000624790 3129 ntBASIC19.85■□□□□ 0.77
CCDC17Q96LX7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 AC131009.4-201ENST00000624048 1740 ntBASIC19.85■□□□□ 0.77
CCDC17Q96LX7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC17Q96LX7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 AC067852.2-201ENST00000590513 2313 ntBASIC19.84■□□□□ 0.77
CCDC17Q96LX7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 AC092474.2-201ENST00000424288 719 ntBASIC19.84■□□□□ 0.77
CCDC17Q96LX7 RN7SL589P-201ENST00000481268 310 ntBASIC19.84■□□□□ 0.77
CCDC17Q96LX7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 RARRES2P8-201ENST00000566335 367 ntBASIC19.84■□□□□ 0.77
CCDC17Q96LX7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 MIR3909-201ENST00000579518 119 ntBASIC19.84■□□□□ 0.77
CCDC17Q96LX7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC17Q96LX7 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC17Q96LX7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC17Q96LX7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC17Q96LX7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.83■□□□□ 0.77
CCDC17Q96LX7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms