Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC005412.3-201ENST00000580309 715 ntBASIC23.84■■□□□ 1.41
USP47Q96K76 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.84■■□□□ 1.41
USP47Q96K76 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.84■■□□□ 1.41
USP47Q96K76 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC23.84■■□□□ 1.41
USP47Q96K76 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
USP47Q96K76 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP47Q96K76 AC022211.2-201ENST00000585075 2527 ntBASIC23.84■■□□□ 1.41
USP47Q96K76 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC23.84■■□□□ 1.41
USP47Q96K76 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP47Q96K76 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC23.84■■□□□ 1.41
USP47Q96K76 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
USP47Q96K76 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
USP47Q96K76 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP47Q96K76 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP47Q96K76 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
USP47Q96K76 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
USP47Q96K76 HARS-203ENST00000431330 1774 ntTSL 2 BASIC23.83■■□□□ 1.41
USP47Q96K76 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.41
USP47Q96K76 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
USP47Q96K76 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP47Q96K76 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
USP47Q96K76 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.83■■□□□ 1.41
USP47Q96K76 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.83■■□□□ 1.41
USP47Q96K76 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC23.83■■□□□ 1.41
USP47Q96K76 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
USP47Q96K76 KRT19P2-202ENST00000557173 1012 ntBASIC23.83■■□□□ 1.41
USP47Q96K76 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP47Q96K76 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.83■■□□□ 1.41
USP47Q96K76 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.83■■□□□ 1.41
USP47Q96K76 AQP6-205ENST00000618286 829 ntTSL 5 BASIC23.83■■□□□ 1.41
USP47Q96K76 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
USP47Q96K76 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP47Q96K76 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
USP47Q96K76 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
USP47Q96K76 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC23.82■■□□□ 1.4
USP47Q96K76 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
USP47Q96K76 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC23.82■■□□□ 1.4
USP47Q96K76 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC23.82■■□□□ 1.4
USP47Q96K76 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.82■■□□□ 1.4
USP47Q96K76 PDPK2P-202ENST00000562415 1191 ntBASIC23.82■■□□□ 1.4
USP47Q96K76 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.82■■□□□ 1.4
USP47Q96K76 BSG-214ENST00000614867 960 ntTSL 3 BASIC23.82■■□□□ 1.4
USP47Q96K76 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
USP47Q96K76 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC23.82■■□□□ 1.4
USP47Q96K76 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
USP47Q96K76 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC23.82■■□□□ 1.4
USP47Q96K76 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC23.82■■□□□ 1.4
USP47Q96K76 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
USP47Q96K76 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP47Q96K76 AC105020.1-201ENST00000435356 2205 ntBASIC23.82■■□□□ 1.4
USP47Q96K76 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC23.81■■□□□ 1.4
USP47Q96K76 AL353732.1-201ENST00000569618 1459 ntBASIC23.81■■□□□ 1.4
USP47Q96K76 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC23.81■■□□□ 1.4
USP47Q96K76 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.81■■□□□ 1.4
USP47Q96K76 RPL28-209ENST00000560055 670 ntTSL 3 BASIC23.81■■□□□ 1.4
USP47Q96K76 AC040169.1-201ENST00000565382 521 ntBASIC23.81■■□□□ 1.4
USP47Q96K76 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.81■■□□□ 1.4
USP47Q96K76 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.81■■□□□ 1.4
USP47Q96K76 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC23.81■■□□□ 1.4
USP47Q96K76 AC004877.2-201ENST00000623941 599 ntBASIC23.81■■□□□ 1.4
USP47Q96K76 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC23.81■■□□□ 1.4
USP47Q96K76 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
USP47Q96K76 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
USP47Q96K76 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 BCAR1-209ENST00000546196 1340 ntBASIC23.81■■□□□ 1.4
USP47Q96K76 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC23.81■■□□□ 1.4
USP47Q96K76 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP47Q96K76 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP47Q96K76 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
USP47Q96K76 AC023274.1-201ENST00000418278 595 ntBASIC23.8■■□□□ 1.4
USP47Q96K76 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP47Q96K76 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
USP47Q96K76 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.8■■□□□ 1.4
USP47Q96K76 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.8■■□□□ 1.4
USP47Q96K76 MIR4492-201ENST00000581627 80 ntBASIC23.8■■□□□ 1.4
USP47Q96K76 MPDU1-223ENST00000582151 728 ntBASIC23.8■■□□□ 1.4
USP47Q96K76 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.8■■□□□ 1.4
USP47Q96K76 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP47Q96K76 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP47Q96K76 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC23.8■■□□□ 1.4
USP47Q96K76 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms