Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.36■□□□□ 0.21
ITCHQ96J02 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
ITCHQ96J02 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ITCHQ96J02 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ITCHQ96J02 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ITCHQ96J02 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.36■□□□□ 0.21
ITCHQ96J02 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.36■□□□□ 0.21
ITCHQ96J02 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
ITCHQ96J02 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.36■□□□□ 0.21
ITCHQ96J02 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ITCHQ96J02 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.35■□□□□ 0.21
ITCHQ96J02 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.35■□□□□ 0.21
ITCHQ96J02 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ITCHQ96J02 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
ITCHQ96J02 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
ITCHQ96J02 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 AL845331.1-201ENST00000424978 1190 ntBASIC16.35■□□□□ 0.21
ITCHQ96J02 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ITCHQ96J02 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.35■□□□□ 0.21
ITCHQ96J02 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.35■□□□□ 0.21
ITCHQ96J02 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ITCHQ96J02 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 LINC01238-205ENST00000567549 1107 ntBASIC16.35■□□□□ 0.21
ITCHQ96J02 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.35■□□□□ 0.21
ITCHQ96J02 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.35■□□□□ 0.21
ITCHQ96J02 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ITCHQ96J02 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ITCHQ96J02 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ITCHQ96J02 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 AL162727.3-201ENST00000635661 2787 ntBASIC16.35■□□□□ 0.21
ITCHQ96J02 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 GPR89P-201ENST00000407924 1495 ntBASIC16.35■□□□□ 0.21
ITCHQ96J02 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.35■□□□□ 0.21
ITCHQ96J02 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ITCHQ96J02 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ITCHQ96J02 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ITCHQ96J02 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ITCHQ96J02 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ITCHQ96J02 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ITCHQ96J02 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.34■□□□□ 0.21
ITCHQ96J02 AC003669.1-201ENST00000334569 611 ntBASIC16.34■□□□□ 0.21
ITCHQ96J02 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ITCHQ96J02 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.34■□□□□ 0.21
ITCHQ96J02 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.34■□□□□ 0.21
ITCHQ96J02 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.34■□□□□ 0.21
ITCHQ96J02 AC009533.2-201ENST00000543664 586 ntBASIC16.34■□□□□ 0.21
ITCHQ96J02 AC011498.5-201ENST00000592027 486 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms