Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IFT43Q96FT9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IFT43Q96FT9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IFT43Q96FT9 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.7■□□□□ 0.42
IFT43Q96FT9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.7■□□□□ 0.42
IFT43Q96FT9 AL590627.1-203ENST00000421194 1026 ntBASIC17.7■□□□□ 0.42
IFT43Q96FT9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 SCARNA2-201ENST00000458748 420 ntBASIC17.7■□□□□ 0.42
IFT43Q96FT9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 AC093909.1-201ENST00000504731 1122 ntBASIC17.7■□□□□ 0.42
IFT43Q96FT9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFT43Q96FT9 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.7■□□□□ 0.42
IFT43Q96FT9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IFT43Q96FT9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IFT43Q96FT9 PP12613-201ENST00000424958 2230 ntBASIC17.7■□□□□ 0.42
IFT43Q96FT9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 AL353593.2-201ENST00000602529 1483 ntBASIC17.69■□□□□ 0.42
IFT43Q96FT9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 AL031284.1-201ENST00000419297 478 ntBASIC17.69■□□□□ 0.42
IFT43Q96FT9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 AC120114.3-201ENST00000611923 658 ntBASIC17.69■□□□□ 0.42
IFT43Q96FT9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IFT43Q96FT9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IFT43Q96FT9 AL023806.1-201ENST00000603994 1649 ntBASIC17.69■□□□□ 0.42
IFT43Q96FT9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 PCDH8P1-201ENST00000428983 2773 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 CROCCP2-202ENST00000412962 2773 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 AC018712.1-201ENST00000455767 687 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 FGFR3P6-201ENST00000457012 610 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 AC073648.2-201ENST00000510116 352 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 STK19B-204ENST00000512515 211 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 STK25P1-201ENST00000585406 838 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 AD001527.2-201ENST00000622994 785 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 AC073592.5-201ENST00000624854 528 ntBASIC17.68■□□□□ 0.42
IFT43Q96FT9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IFT43Q96FT9 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IFT43Q96FT9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms