Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.08■□□□□ 0.32
ECHDC3Q96DC8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.07■□□□□ 0.32
ECHDC3Q96DC8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 AP001094.4-201ENST00000579008 2176 ntBASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ECHDC3Q96DC8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 KRT8P49-201ENST00000604166 1432 ntBASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AL021920.2-201ENST00000624828 1351 ntBASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AC004832.2-201ENST00000426397 482 ntBASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ECHDC3Q96DC8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms