Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 AC211429.1-201ENST00000415277 523 ntBASIC16.33■□□□□ 0.2
LRRC58Q96CX6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 AP002490.2-201ENST00000524791 560 ntBASIC16.33■□□□□ 0.2
LRRC58Q96CX6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 AC125634.1-201ENST00000438758 1403 ntBASIC16.33■□□□□ 0.2
LRRC58Q96CX6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 Z83836.1-201ENST00000624605 1642 ntBASIC16.33■□□□□ 0.2
LRRC58Q96CX6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRC58Q96CX6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 AL391256.1-201ENST00000443260 1855 ntBASIC16.32■□□□□ 0.2
LRRC58Q96CX6 ATP5G1P1-201ENST00000448724 379 ntBASIC16.32■□□□□ 0.2
LRRC58Q96CX6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 RNF126P1-202ENST00000569893 925 ntBASIC16.32■□□□□ 0.2
LRRC58Q96CX6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRC58Q96CX6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.31■□□□□ 0.2
LRRC58Q96CX6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC58Q96CX6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 AC132872.4-202ENST00000622924 2756 ntBASIC16.3■□□□□ 0.2
LRRC58Q96CX6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC58Q96CX6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms