Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 IGHV3-52-201ENST00000519770 353 ntBASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLCO4A1Q96BD0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 AC128688.1-201ENST00000487626 519 ntBASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SLCO4A1Q96BD0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 GPR89P-201ENST00000407924 1495 ntBASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 KRT18P48-201ENST00000434763 852 ntBASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 AP002490.2-201ENST00000524791 560 ntBASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 GCSHP2-201ENST00000560971 527 ntBASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 AL136038.4-201ENST00000603606 1261 ntBASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 FAM87A-204ENST00000613235 858 ntBASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 AC010947.1-201ENST00000623454 693 ntBASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 AL603832.2-201ENST00000566195 2125 ntBASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLCO4A1Q96BD0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms