Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX1Q92499 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX1Q92499 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
DDX1Q92499 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
DDX1Q92499 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX1Q92499 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX1Q92499 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX1Q92499 AC139887.3-201ENST00000568585 713 ntBASIC18.22■□□□□ 0.51
DDX1Q92499 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX1Q92499 AL589182.2-201ENST00000619332 1049 ntBASIC18.22■□□□□ 0.51
DDX1Q92499 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
DDX1Q92499 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.22■□□□□ 0.51
DDX1Q92499 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
DDX1Q92499 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DDX1Q92499 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
DDX1Q92499 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX1Q92499 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.22■□□□□ 0.51
DDX1Q92499 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
DDX1Q92499 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX1Q92499 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
DDX1Q92499 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX1Q92499 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
DDX1Q92499 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX1Q92499 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DDX1Q92499 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 RPS2P28-201ENST00000314255 741 ntBASIC18.21■□□□□ 0.51
DDX1Q92499 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 UPF3AP3-201ENST00000420996 769 ntBASIC18.21■□□□□ 0.51
DDX1Q92499 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.21■□□□□ 0.51
DDX1Q92499 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX1Q92499 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
DDX1Q92499 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.21■□□□□ 0.51
DDX1Q92499 MTDHP4-201ENST00000600287 670 ntBASIC18.21■□□□□ 0.51
DDX1Q92499 AC025062.2-201ENST00000605477 670 ntBASIC18.21■□□□□ 0.51
DDX1Q92499 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX1Q92499 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX1Q92499 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
DDX1Q92499 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
DDX1Q92499 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.21■□□□□ 0.51
DDX1Q92499 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX1Q92499 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX1Q92499 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX1Q92499 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DDX1Q92499 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.21■□□□□ 0.5
DDX1Q92499 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DDX1Q92499 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
DDX1Q92499 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX1Q92499 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DDX1Q92499 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX1Q92499 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX1Q92499 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX1Q92499 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX1Q92499 AP001160.2-201ENST00000596071 487 ntBASIC18.2■□□□□ 0.5
DDX1Q92499 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX1Q92499 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX1Q92499 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX1Q92499 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX1Q92499 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX1Q92499 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms