Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM4Q8WVI0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AL136379.1-201ENST00000623471 2642 ntBASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AC007663.1-201ENST00000438948 1240 ntBASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AC006058.3-201ENST00000606217 1069 ntBASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM4Q8WVI0 TUBB8P12-201ENST00000308911 1335 ntBASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 TUBB7P-202ENST00000428444 1305 ntBASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 TUBB8P7-204ENST00000567960 1332 ntBASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AL355802.2-201ENST00000402069 882 ntBASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 TSPY12P-201ENST00000421279 868 ntBASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 RPPH1-201ENST00000516869 333 ntBASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AL157888.1-201ENST00000631930 593 ntBASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AC116562.4-202ENST00000641738 218 ntBASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.66□□□□□ -0.06
SMIM4Q8WVI0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms