Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LMO3Q8TAP4 AL118508.1-201ENST00000613502 2345 ntBASIC18.31■□□□□ 0.52
LMO3Q8TAP4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 AL021920.2-201ENST00000624828 1351 ntBASIC18.3■□□□□ 0.52
LMO3Q8TAP4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 RPS15P9-201ENST00000494093 319 ntBASIC18.3■□□□□ 0.52
LMO3Q8TAP4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 AL391256.1-201ENST00000443260 1855 ntBASIC18.3■□□□□ 0.52
LMO3Q8TAP4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LMO3Q8TAP4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 FAAHP1-202ENST00000446499 1238 ntBASIC18.29■□□□□ 0.52
LMO3Q8TAP4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 RNA5SP419-201ENST00000515908 135 ntBASIC18.29■□□□□ 0.52
LMO3Q8TAP4 AP002469.2-201ENST00000531724 424 ntBASIC18.29■□□□□ 0.52
LMO3Q8TAP4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 FAM215A-202ENST00000632077 792 ntBASIC18.29■□□□□ 0.52
LMO3Q8TAP4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 PI4KAP1-204ENST00000612579 1703 ntBASIC18.29■□□□□ 0.52
LMO3Q8TAP4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 TOP3BP1-201ENST00000420768 1380 ntBASIC18.29■□□□□ 0.52
LMO3Q8TAP4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.29■□□□□ 0.52
LMO3Q8TAP4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 AP002414.3-201ENST00000589352 1468 ntBASIC18.28■□□□□ 0.52
LMO3Q8TAP4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 AC004870.1-201ENST00000315132 882 ntBASIC18.28■□□□□ 0.52
LMO3Q8TAP4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.28■□□□□ 0.52
LMO3Q8TAP4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms