Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 SLC25A1P3-201ENST00000395415 828 ntBASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 SPTLC1P1-201ENST00000447199 261 ntBASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 AC012317.2-201ENST00000623305 2251 ntBASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
KLHDC9Q8NEP7 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 OR8S1-201ENST00000310194 1080 ntBASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 SLC25A6P5-201ENST00000435663 894 ntBASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 LINC00895-201ENST00000629028 1637 ntBASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KLHDC9Q8NEP7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 RN7SL692P-201ENST00000464677 288 ntBASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 HLA-V-204ENST00000476601 1289 ntBASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 MIR4492-201ENST00000581627 80 ntBASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KLHDC9Q8NEP7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms