Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EFCAB3Q8N7B9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFCAB3Q8N7B9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
EFCAB3Q8N7B9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCAB3Q8N7B9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCAB3Q8N7B9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.15■□□□□ 0.34
EFCAB3Q8N7B9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
EFCAB3Q8N7B9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.15■□□□□ 0.34
EFCAB3Q8N7B9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
EFCAB3Q8N7B9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
EFCAB3Q8N7B9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 KRT89P-201ENST00000620027 1478 ntBASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 AL390039.1-201ENST00000399148 611 ntBASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 EMBP1-201ENST00000458200 901 ntBASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 AC009078.2-202ENST00000463353 338 ntBASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 AP003733.1-201ENST00000491725 852 ntBASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 AC079776.4-201ENST00000511039 504 ntBASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
EFCAB3Q8N7B9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AC132938.6-201ENST00000623828 1655 ntBASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AC113404.2-201ENST00000507884 177 ntBASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AP000867.3-201ENST00000524675 377 ntBASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AL160237.2-201ENST00000556165 472 ntBASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AC005014.3-201ENST00000605985 190 ntBASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AC004263.2-201ENST00000617183 678 ntBASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AL031008.1-201ENST00000619963 541 ntBASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 HYMAI-201ENST00000635591 3347 ntBASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFCAB3Q8N7B9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCAB3Q8N7B9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCAB3Q8N7B9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.12■□□□□ 0.33
EFCAB3Q8N7B9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EFCAB3Q8N7B9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.12■□□□□ 0.33
EFCAB3Q8N7B9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.12■□□□□ 0.33
EFCAB3Q8N7B9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
EFCAB3Q8N7B9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFCAB3Q8N7B9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms