Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 TFAMP1-201ENST00000412727 736 ntBASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 BASP1P1-201ENST00000430708 665 ntBASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 INGX-202ENST00000489074 768 ntBASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 KRT8P48-201ENST00000515599 1220 ntBASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 AC069262.1-201ENST00000539058 672 ntBASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 MIR4515-201ENST00000584082 81 ntBASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 AP001059.3-201ENST00000619053 235 ntBASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SYNPOQ8N3V7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 AC090340.1-201ENST00000620778 4980 ntBASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 AC079140.1-201ENST00000508039 487 ntBASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 RARRES2P8-201ENST00000566335 367 ntBASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 AC051619.7-201ENST00000568314 623 ntBASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPOQ8N3V7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms