Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 RN7SL510P-201ENST00000581311 263 ntBASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.53■□□□□ 0.56
ZC3H3Q8IXZ2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 AC006538.1-201ENST00000567905 1585 ntBASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 RPS2P1-201ENST00000434010 821 ntBASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 HNRNPDP1-201ENST00000439535 754 ntBASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 AC107918.2-201ENST00000530817 355 ntBASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 AL691432.3-201ENST00000621860 400 ntBASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZC3H3Q8IXZ2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ZC3H3Q8IXZ2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.52■□□□□ 0.55
ZC3H3Q8IXZ2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.52■□□□□ 0.55
ZC3H3Q8IXZ2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZC3H3Q8IXZ2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.52■□□□□ 0.55
ZC3H3Q8IXZ2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.52■□□□□ 0.55
ZC3H3Q8IXZ2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 RNPS1P1-201ENST00000507437 918 ntBASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 AL121912.1-201ENST00000603683 238 ntBASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZC3H3Q8IXZ2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 RPS15P9-201ENST00000494093 319 ntBASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 OR7E14P-202ENST00000530490 1290 ntBASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 MPDU1-223ENST00000582151 728 ntBASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 AC008735.5-201ENST00000623544 497 ntBASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZC3H3Q8IXZ2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 PCDHB19P-201ENST00000570871 2371 ntBASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZC3H3Q8IXZ2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms