Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCUBE3Q8IX30 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 AC022211.2-201ENST00000585075 2527 ntBASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 KRT18P13-201ENST00000400056 1290 ntBASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SCUBE3Q8IX30 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 AP002414.1-201ENST00000391405 1147 ntBASIC18■□□□□ 0.47
SCUBE3Q8IX30 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 AC098831.1-202ENST00000438821 336 ntBASIC18■□□□□ 0.47
SCUBE3Q8IX30 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 AL805961.1-202ENST00000641562 540 ntBASIC18■□□□□ 0.47
SCUBE3Q8IX30 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18■□□□□ 0.47
SCUBE3Q8IX30 PKD1P1-201ENST00000458669 6805 ntBASIC18■□□□□ 0.47
SCUBE3Q8IX30 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SCUBE3Q8IX30 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 IGHV3-22-201ENST00000520721 359 ntBASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.99■□□□□ 0.47
SCUBE3Q8IX30 TERC-201ENST00000602385 541 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms