Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 TERF1P3-201ENST00000505638 1227 ntBASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 REXO1L3P-201ENST00000622202 1288 ntBASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RP1L1Q8IWN7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 AC008677.1-201ENST00000519230 1561 ntBASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 AC009336.1-201ENST00000608941 1553 ntBASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 AC005237.2-201ENST00000434368 219 ntBASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 AL135744.1-201ENST00000565098 629 ntBASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RP1L1Q8IWN7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 AC002056.1-201ENST00000395613 760 ntBASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 ACTL9-202ENST00000612068 1252 ntBASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RP1L1Q8IWN7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms