Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 LINC00982-205ENST00000420957 435 ntBASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 AP001269.4-201ENST00000609611 512 ntBASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TUBB8P12-201ENST00000308911 1335 ntBASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TUBB7P-202ENST00000428444 1305 ntBASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TUBB8P7-204ENST00000567960 1332 ntBASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 AP005117.1-201ENST00000584346 1413 ntBASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 AP002490.2-201ENST00000524791 560 ntBASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 AC078925.2-201ENST00000624013 1973 ntBASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDKL3Q8IVW4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 FLJ38576-201ENST00000623820 2459 ntBASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 AC124067.4-201ENST00000519691 2379 ntBASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 UPK3BP1-201ENST00000428678 509 ntBASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 AC132008.2-207ENST00000454517 770 ntBASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 FOSL1P1-201ENST00000511041 816 ntBASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.59■□□□□ 0.41
CDKL3Q8IVW4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms