Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 SPDYE15P-201ENST00000424157 909 ntBASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.07■□□□□ 0.32
NUDCD3Q8IVD9 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 MIR662-201ENST00000384847 95 ntBASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 AC092597.1-201ENST00000487352 616 ntBASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 AL441883.1-201ENST00000566170 1045 ntBASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUDCD3Q8IVD9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 STARP1-201ENST00000397973 869 ntBASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 AC007967.3-201ENST00000434308 558 ntBASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
NUDCD3Q8IVD9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms