Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 LINC02012-201ENST00000608206 1725 ntBASIC15.3■□□□□ 0.04
LRRC28Q86X40 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 AC016734.2-201ENST00000624325 1377 ntBASIC15.3■□□□□ 0.04
LRRC28Q86X40 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.3■□□□□ 0.04
LRRC28Q86X40 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRRC28Q86X40 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 AC046185.3-201ENST00000623228 1824 ntBASIC15.29■□□□□ 0.04
LRRC28Q86X40 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 IGHGP-201ENST00000390555 1178 ntBASIC15.29■□□□□ 0.04
LRRC28Q86X40 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 TSSC2-201ENST00000450217 709 ntBASIC15.29■□□□□ 0.04
LRRC28Q86X40 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 GPR32P1-201ENST00000601788 811 ntBASIC15.29■□□□□ 0.04
LRRC28Q86X40 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRRC28Q86X40 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRRC28Q86X40 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 Z83836.1-201ENST00000624605 1642 ntBASIC15.28■□□□□ 0.04
LRRC28Q86X40 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 AC078925.2-201ENST00000624013 1973 ntBASIC15.28■□□□□ 0.04
LRRC28Q86X40 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 ATP5G2P1-201ENST00000433580 426 ntBASIC15.28■□□□□ 0.04
LRRC28Q86X40 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 AL390719.2-201ENST00000606993 987 ntBASIC15.28■□□□□ 0.04
LRRC28Q86X40 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.28■□□□□ 0.04
LRRC28Q86X40 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRRC28Q86X40 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRC28Q86X40 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRC28Q86X40 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms