Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 RBM17P3-201ENST00000417687 1192 ntBASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 HCG4P8-203ENST00000443049 980 ntBASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHD1LQ86WJ1 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHD1LQ86WJ1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 KRT18P31-201ENST00000506277 1292 ntBASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 AL022326.1-202ENST00000641533 845 ntBASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD1LQ86WJ1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 AL603756.1-201ENST00000606511 2163 ntBASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 MTDHP3-201ENST00000594186 672 ntBASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 AL139288.1-201ENST00000623748 933 ntBASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD1LQ86WJ1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 AL356309.3-201ENST00000624132 1934 ntBASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 TSPY19P-201ENST00000418461 509 ntBASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 TSPY18P-201ENST00000441642 509 ntBASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD1LQ86WJ1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms