Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 AC130371.2-201ENST00000619443 611 ntBASIC14.29□□□□□ -0.12
ZNF546Q86UE3 CR392000.1-201ENST00000624770 1228 ntBASIC14.29□□□□□ -0.12
ZNF546Q86UE3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF546Q86UE3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 AL355802.2-201ENST00000402069 882 ntBASIC14.28□□□□□ -0.12
ZNF546Q86UE3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 KRT18P23-201ENST00000435622 1283 ntBASIC14.28□□□□□ -0.12
ZNF546Q86UE3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 MIR6786-201ENST00000616843 113 ntBASIC14.28□□□□□ -0.12
ZNF546Q86UE3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF546Q86UE3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 MTHFR-217ENST00000641820 1569 ntBASIC14.27□□□□□ -0.12
ZNF546Q86UE3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF546Q86UE3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms