Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 LINC01126-201ENST00000623515 1646 ntBASIC11.41□□□□□ -0.58
SCXQ7RTU7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.41□□□□□ -0.58
SCXQ7RTU7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SCXQ7RTU7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 AC009533.2-201ENST00000543664 586 ntBASIC11.4□□□□□ -0.58
SCXQ7RTU7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 BX640515.1-201ENST00000617215 977 ntBASIC11.4□□□□□ -0.58
SCXQ7RTU7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.4□□□□□ -0.58
SCXQ7RTU7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.4□□□□□ -0.58
SCXQ7RTU7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 AL645608.8-201ENST00000606034 2086 ntBASIC11.4□□□□□ -0.58
SCXQ7RTU7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SCXQ7RTU7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC11.4□□□□□ -0.59
SCXQ7RTU7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.4□□□□□ -0.59
SCXQ7RTU7 AC011676.5-201ENST00000624864 2660 ntBASIC11.4□□□□□ -0.59
SCXQ7RTU7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
SCXQ7RTU7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SCXQ7RTU7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
SCXQ7RTU7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SCXQ7RTU7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SCXQ7RTU7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.4□□□□□ -0.59
SCXQ7RTU7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SCXQ7RTU7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SCXQ7RTU7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SCXQ7RTU7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SCXQ7RTU7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SCXQ7RTU7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.39□□□□□ -0.59
SCXQ7RTU7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SCXQ7RTU7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SCXQ7RTU7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SCXQ7RTU7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms