Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF44Q7L0R7 AC104109.2-201ENST00000602919 1418 ntBASIC16.44■□□□□ 0.22
RNF44Q7L0R7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 AC108073.2-201ENST00000464002 357 ntBASIC16.43■□□□□ 0.22
RNF44Q7L0R7 AC108751.1-201ENST00000490852 363 ntBASIC16.43■□□□□ 0.22
RNF44Q7L0R7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 AC034105.1-201ENST00000563488 319 ntBASIC16.43■□□□□ 0.22
RNF44Q7L0R7 AC106730.1-201ENST00000566722 1090 ntBASIC16.43■□□□□ 0.22
RNF44Q7L0R7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 PP12613-201ENST00000424958 2230 ntBASIC16.43■□□□□ 0.22
RNF44Q7L0R7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF44Q7L0R7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.42■□□□□ 0.22
RNF44Q7L0R7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 GGTLC5P-201ENST00000617623 998 ntBASIC16.42■□□□□ 0.22
RNF44Q7L0R7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 AF228730.7-201ENST00000641842 219 ntBASIC16.42■□□□□ 0.22
RNF44Q7L0R7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF44Q7L0R7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 ZNF259P1-201ENST00000407656 1365 ntBASIC16.41■□□□□ 0.22
RNF44Q7L0R7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF44Q7L0R7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms