Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL513480.1-201ENST00000451731 511 ntBASIC14.1□□□□□ -0.15
VPS13CQ709C8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 AC012569.1-201ENST00000591191 1524 ntBASIC14.1□□□□□ -0.15
VPS13CQ709C8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 SNX29P1-201ENST00000548357 1007 ntBASIC14.09□□□□□ -0.15
VPS13CQ709C8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 MIR658-201ENST00000385210 100 ntBASIC14.09□□□□□ -0.15
VPS13CQ709C8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 AC008494.3-201ENST00000606615 944 ntBASIC14.09□□□□□ -0.15
VPS13CQ709C8 AL645728.2-201ENST00000641974 660 ntBASIC14.09□□□□□ -0.15
VPS13CQ709C8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13CQ709C8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.09□□□□□ -0.15
VPS13CQ709C8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VPS13CQ709C8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.08□□□□□ -0.15
VPS13CQ709C8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.08□□□□□ -0.15
VPS13CQ709C8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.08□□□□□ -0.15
VPS13CQ709C8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
VPS13CQ709C8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.08□□□□□ -0.15
VPS13CQ709C8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VPS13CQ709C8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 TEX28P1-201ENST00000613479 1221 ntBASIC14.08□□□□□ -0.16
VPS13CQ709C8 TEX28P2-201ENST00000617764 1221 ntBASIC14.08□□□□□ -0.16
VPS13CQ709C8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 AC140912.1-201ENST00000577171 1054 ntBASIC14.08□□□□□ -0.16
VPS13CQ709C8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13CQ709C8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13CQ709C8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS13CQ709C8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13CQ709C8 IGHV3-42-201ENST00000520410 361 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms