Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 AC068472.1-201ENST00000474589 881 ntBASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 PCDHB17P-201ENST00000539533 2393 ntBASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PTCHD4Q6ZW05 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 AK4P3-201ENST00000418260 669 ntBASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 HOMER2P1-201ENST00000455653 964 ntBASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 AC092068.3-201ENST00000587894 2016 ntBASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 AC005332.3-201ENST00000589904 676 ntBASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 AC063926.3-201ENST00000624734 5658 ntBASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTCHD4Q6ZW05 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 AL391005.1-201ENST00000623953 2435 ntBASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 FLJ16779-201ENST00000612722 7638 ntBASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 SPDYE13P-201ENST00000445314 798 ntBASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 RNF126P1-202ENST00000569893 925 ntBASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 AL390719.2-201ENST00000606993 987 ntBASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.8■□□□□ 0.12
PTCHD4Q6ZW05 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms