Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 BCL2-203ENST00000589955 5011 ntBASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 MPDU1-223ENST00000582151 728 ntBASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 AC004233.3-201ENST00000607794 1269 ntBASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 AC003101.2-201ENST00000612557 442 ntBASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 AC007967.4-201ENST00000614700 386 ntBASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 RN7SL692P-201ENST00000464677 288 ntBASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 MEIS3P1-201ENST00000495167 958 ntBASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 AC021097.1-201ENST00000607902 574 ntBASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 AL008721.1-201ENST00000609964 604 ntBASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 AP3S2-216ENST00000617003 1561 ntBASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CNKSR3Q6P9H4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 AC133963.1-201ENST00000504166 1679 ntBASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 COX5BP8-201ENST00000416911 349 ntBASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CNKSR3Q6P9H4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms